Publications
List of Publications
Hynes, C., Kakumani, P. K. (2024) Regulatory role of RNA-binding proteins in microRNA biogenesis. Frontiers in Molecular Biosciences, https://www.frontiersin.org/articles/10.3389/fmolb.2024.1374843/full
Kakumani, P. K., Ko, Y., Ramakrishna, S., Christopher, G., Dodgson, M., Shrinet, J., Harvey, L.M., Shin, C., Simard, M.J. (2023) CSDE1 promotes miR-451 biogenesis. Nucleic Acids Research, https://doi.org/10.1093/nar/gkad619
Kakumani, P.K. (2022) AGO-RBP crosstalk on target mRNAs: Implications in miRNA-guided gene silencing and cancer. Translational Oncology, 21, 101434. https://doi.org/10.1016/j.tranon.2022.101434
Kakumani, P. K., Guitart, T., Houle, F., Harvey, L. M., Goyer, B., Germain, L., Gebauer, F., & Simard, M. J. (2021). CSDE1 attenuates microRNA-mediated silencing of PMEPA1 in melanoma. Oncogene, 40(18), 3231–3244. https://doi.org/10.1038/s41388-021-01767-9
Kakumani, P. K., Harvey, L. M., Houle, F., Guitart, T., Gebauer, F., & Simard, M. J. (2020). CSDE1 controls gene expression through the miRNA-mediated decay machinery. Life Science Alliance, 3(4), e201900632. https://doi.org/10.26508/lsa.201900632
Kakumani, P. K., Medigeshi, G. R., Kaur, I., Malhotra, P., Mukherjee, S. K., & Bhatnagar, R. K. (2016). Role of human GRP75 in miRNA mediated regulation of dengue virus replication. Gene, 586(1), 7–11. https://doi.org/10.1016/j.gene.2016.03.053
Kakumani, P. K., Shanmugam, R. K., Kaur, I., Malhotra, P., Mukherjee, S. K., & Bhatnagar, R. K. (2015). Association of HADHA with human RNA silencing machinery. Biochemical and Biophysical Research Communications, 466(3), 481–485. https://doi.org/10.1016/j.bbrc.2015.09.055
Kakumani, P. K., Shukla, R., Todur, V. N., Malhotra, P., Mukherjee, S. K., & Bhatnagar, R. K. (2015). De novo transcriptome assembly and analysis of Sf21 cells using illumina paired end sequencing. Biology Direct, 10, 44. https://doi.org/10.1186/s13062-015-0072-7
Kakumani, P. K., Rajgokul, K. S., Ponia, S. S., Kaur, I., Mahanty, S., Medigeshi, G. R., Banerjea, A. C., Chopra, A. P., Malhotra, P., Mukherjee, S. K., & Bhatnagar, R. K. (2015). Dengue NS3, an RNAi suppressor, modulates the human miRNA pathways through its interacting partner. The Biochemical Journal, 471(1), 89–99. https://doi.org/10.1042/BJ20150445
Kakumani, P. K., Chinnappan, M., Singh, A. K., Malhotra, P., Mukherjee, S. K., & Bhatnagar, R. K. (2015). Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21. PloS One, 10(2), e0116988. https://doi.org/10.1371/journal.pone.0116988
Ghosh, S., Kakumani, P. K., Kumar, A., Malhotra, P., Mukherjee, S. K., & Bhatnagar, R. K. (2014). Genome wide screening of RNAi factors of Sf21 cells reveal several novel pathway associated proteins. BMC Genomics, 15, 775. https://doi.org/10.1186/1471-2164-15-775
Kakumani, P. K., Malhotra, P., Mukherjee, S. K., & Bhatnagar, R. K. (2014). A draft genome assembly of the army worm, Spodoptera frugiperda. Genomics, 104(2), 134–143. https://doi.org/10.1016/j.ygeno.2014.06.005
Chinnappan, M., Singh, A. K., Kakumani, P. K., Kumar, G., Rooge, S. B., Kumari, A., Varshney, A., Rastogi, A., Singh, A. K., Sarin, S. K., Malhotra, P., Mukherjee, S. K., & Bhatnagar, R. K. (2014). Key elements of the RNAi pathway are regulated by hepatitis B virus replication and HBx acts as a viral suppressor of RNA silencing. The Biochemical Journal, 462(2), 347–358. https://doi.org/10.1042/BJ20140316
Kakumani, P. K., Ponia, S. S., S, R. K., Sood, V., Chinnappan, M., Banerjea, A. C., Medigeshi, G. R., Malhotra, P., Mukherjee, S. K., & Bhatnagar, R. K. (2013). Role of RNA interference (RNAi) in dengue virus replication and identification of NS4B as an RNAi suppressor. Journal of Virology, 87(16), 8870–8883. https://doi.org/10.1128/JVI.02774-12